HL_9EHO_062
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUGAUCCUGC
- Length
- 11 nucleotides
- Bulged bases
- 9EHO|1|AA|U|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|G|7
9EHO|1|AA|U|8
9EHO|1|AA|U|9
9EHO|1|AA|G|10
9EHO|1|AA|A|11
9EHO|1|AA|U|12
9EHO|1|AA|C|13
9EHO|1|AA|C|14
9EHO|1|AA|U|15
9EHO|1|AA|G|16
9EHO|1|AA|C|17
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain DD
- Small ribosomal subunit protein uS5
- Chain YY
- Small ribosomal subunit protein uS12
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