HL_9EHO_070

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGACUCUGUCGAGGCCC

Length

17 nucleotides

Bulged bases

9EHO|1|AA|G|786, 9EHO|1|AA|C|793

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|G|779
9EHO|1|AA|G|780
9EHO|1|AA|A|781
9EHO|1|AA|C|782
9EHO|1|AA|U|783
9EHO|1|AA|C|784
9EHO|1|AA|U|785
9EHO|1|AA|G|786
9EHO|1|AA|U|787
9EHO|1|AA|C|788
9EHO|1|AA|G|789
9EHO|1|AA|A|790
9EHO|1|AA|G|791
9EHO|1|AA|G|792
9EHO|1|AA|C|793
9EHO|1|AA|C|794
9EHO|1|AA|C|795

Current chains

Chain AA

18S rRNA

Nearby chains

Chain KK

Small ribosomal subunit protein uS4

Chain ff

eS30