HL_9EHO_077
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EHO_077 not in the Motif Atlas
- Homologous match to HL_9PN5_099
- Geometric discrepancy: 0.0908
- The information below is about HL_9PN5_099
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9EHO|1|AA|G|1762
9EHO|1|AA|G|1763
9EHO|1|AA|A|1764
9EHO|1|AA|A|1765
9EHO|1|AA|A|1766
9EHO|1|AA|C|1767
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain DD
- Small ribosomal subunit protein uS5
- Chain XX
- 40S ribosomal protein S15a
- Chain bb
- 40S ribosomal protein S26
Coloring options: