HL_9EHO_080

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUCGAUAGCU

Length

10 nucleotides

Bulged bases

9EHO|1|AA|U|1917, 9EHO|1|AA|G|1919

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|A|1912
9EHO|1|AA|U|1913
9EHO|1|AA|C|1914
9EHO|1|AA|G|1915
9EHO|1|AA|A|1916
9EHO|1|AA|U|1917
9EHO|1|AA|A|1918
9EHO|1|AA|G|1919
9EHO|1|AA|C|1920
9EHO|1|AA|U|1921

Current chains

Chain AA

18S rRNA

Nearby chains

Chain QQ

Small ribosomal subunit protein uS19

Chain ee

Small ribosomal subunit protein uS14