HL_9EHO_085
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCCUGGAACCAAC
- Length
- 13 nucleotides
- Bulged bases
- 9EHO|1|AA|C|2527, 9EHO|1|AA|C|2528
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|G|2519
9EHO|1|AA|C|2520
9EHO|1|AA|C|2521
9EHO|1|AA|U|2522
9EHO|1|AA|G|2523
9EHO|1|AA|G|2524
9EHO|1|AA|A|2525
9EHO|1|AA|A|2526
9EHO|1|AA|C|2527
9EHO|1|AA|C|2528
9EHO|1|AA|A|2529
9EHO|1|AA|A|2530
9EHO|1|AA|C|2531
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain QQ
- Small ribosomal subunit protein uS19
- Chain TT
- Small ribosomal subunit protein uS13
- Chain UU
- 40S ribosomal protein S19
- Chain ee
- Small ribosomal subunit protein uS14
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