HL_9F1B_018

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GAGGUGAAAU(PSU)C

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|A2|G|957
9F1B|1|A2|A|958
9F1B|1|A2|G|959
9F1B|1|A2|G|960
9F1B|1|A2|U|961
9F1B|1|A2|G|962
9F1B|1|A2|A|963
9F1B|1|A2|A|964
9F1B|1|A2|A|965
9F1B|1|A2|U|966
9F1B|1|A2|PSU|967
9F1B|1|A2|C|968

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Aa

40S ribosomal protein S3a

Chain Ae

Ribosomal protein S5

Chain An

Small ribosomal subunit protein uS11

Chain B5

Large subunit ribosomal RNA; LSU rRNA