HL_9F1B_023
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UGCAAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1B_023 not in the Motif Atlas
- Homologous match to HL_8C3A_216
- Geometric discrepancy: 0.075
- The information below is about HL_8C3A_216
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 302
Unit IDs
9F1B|1|A2|U|1179
9F1B|1|A2|G|1180
9F1B|1|A2|C|1181
9F1B|1|A2|A|1182
9F1B|1|A2|A|1183
9F1B|1|A2|A|1184
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Az
- 60S ribosomal protein L41
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bp
- 60S ribosomal protein L37a
Coloring options: