HL_9F1B_031

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GAUUGCAAUUAU(PSU)C

Length

14 nucleotides

Bulged bases

9F1B|1|A2|U|1622, 9F1B|1|A2|U|1623, 9F1B|1|A2|A|1624

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|A2|G|1614
9F1B|1|A2|A|1615
9F1B|1|A2|U|1616
9F1B|1|A2|U|1617
9F1B|1|A2|G|1618
9F1B|1|A2|C|1619
9F1B|1|A2|A|1620
9F1B|1|A2|A|1621
9F1B|1|A2|U|1622
9F1B|1|A2|U|1623
9F1B|1|A2|A|1624
9F1B|1|A2|U|1625
9F1B|1|A2|PSU|1626
9F1B|1|A2|C|1627

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AG

40S ribosomal protein S29

Chain Ao

40S ribosomal protein uS19

Chain Ar

40S ribosomal protein S18

Chain As

40S ribosomal protein S19