HL_9F1B_073

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9F1B_073 not in the Motif Atlas

Geometric match to HL_2ZZM_003

Geometric discrepancy: 0.1515

The information below is about HL_2ZZM_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9F1B|1|B5|C|2404
9F1B|1|B5|G|2405
9F1B|1|B5|C|2406
9F1B|1|B5|G|2407
9F1B|1|B5|A|2408
9F1B|1|B5|G|2409

Current chains

Chain B5

28S rRNA

Nearby chains