HL_9F1B_093

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GUCAAACGGUA(6MZ)CGC

Length

15 nucleotides

Bulged bases

9F1B|1|B5|A|3960, 9F1B|1|B5|C|3967

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|G|3955
9F1B|1|B5|U|3956
9F1B|1|B5|C|3957
9F1B|1|B5|A|3958
9F1B|1|B5|A|3959
9F1B|1|B5|A|3960
9F1B|1|B5|C|3961
9F1B|1|B5|G|3962
9F1B|1|B5|G|3963
9F1B|1|B5|U|3964
9F1B|1|B5|A|3965
9F1B|1|B5|6MZ|3966
9F1B|1|B5|C|3967
9F1B|1|B5|G|3968
9F1B|1|B5|C|3969

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BI

60S ribosomal protein L10

Chain BT

60S ribosomal protein L21

Chain Bb

60S ribosomal protein L29