HL_9F1C_095
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- CAGAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1C_095 not in the Motif Atlas
- Homologous match to HL_8C3A_058
- Geometric discrepancy: 0.3416
- The information below is about HL_8C3A_058
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
9F1C|1|B5|C|4016
9F1C|1|B5|A|4017
9F1C|1|B5|G|4018
9F1C|1|B5|A|4019
9F1C|1|B5|A|4020
9F1C|1|B5|G|4021
9F1C|1|B5|G|4022
9F1C|1|B5|G|4023
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain AT
- P-site tRNA
- Chain BI
- 60S ribosomal protein L10
- Chain BT
- 60S ribosomal protein L21
- Chain Bo
- Large ribosomal subunit protein eL42
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