HL_9F1D_121

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

9F1D|1|B5|C|1309, 9F1D|1|B5|A|1315

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|U|1308
9F1D|1|B5|C|1309
9F1D|1|B5|G|1310
9F1D|1|B5|C|1311
9F1D|1|B5|A|1312
9F1D|1|B5|C|1313
9F1D|1|B5|G|1314
9F1D|1|B5|A|1315
9F1D|1|B5|A|1316
9F1D|1|B5|A|1317

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B8

5.8S ribosomal RNA; 5.8S rRNA

Chain BC

60S ribosomal protein L4

Chain BL

Large ribosomal subunit protein eL13

Chain BN

Ribosomal protein L15

Chain BY

Ribosomal protein L26