HL_9FBV_047
3D structure
- PDB id
- 9FBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with P-site initiatior tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGACCAUC
- Length
- 8 nucleotides
- Bulged bases
- 9FBV|1|a|G|411
- QA status
- Valid loop
Sequence variability
- 
                            If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
                            
- R3DSVS
Structural variability across Equivalence Class
- 
                            The link below will give the loop's structural variability across the equivalence class for this chain.
                            
- R3DMCS EC
Structural variability across Rfam
- 
                            If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
                            
- R3DMCS Rfam
- HL_9FBV_047 not in the Motif Atlas
- Homologous match to HL_5J7L_146
- Geometric discrepancy: 0.0612
- The information below is about HL_5J7L_146
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_30680.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9FBV|1|a|G|410
  9FBV|1|a|G|411
  9FBV|1|a|A|412
  9FBV|1|a|C|413
  9FBV|1|a|C|414
  9FBV|1|a|A|415
  9FBV|1|a|U|416
  9FBV|1|a|C|417
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain k
- 50S ribosomal protein L15
Coloring options: