HL_9FQZ_047

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UCAAACGGUA(6MZ)CG

Length

13 nucleotides

Bulged bases

9FQZ|1|L5|A|4214, 9FQZ|1|L5|C|4221

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|U|4210
9FQZ|1|L5|C|4211
9FQZ|1|L5|A|4212
9FQZ|1|L5|A|4213
9FQZ|1|L5|A|4214
9FQZ|1|L5|C|4215
9FQZ|1|L5|G|4216
9FQZ|1|L5|G|4217
9FQZ|1|L5|U|4218
9FQZ|1|L5|A|4219
9FQZ|1|L5|6MZ|4220
9FQZ|1|L5|C|4221
9FQZ|1|L5|G|4222

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29