HL_9FQZ_052

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

U(PSU)UGGGUUU(PSU)A

Length

11 nucleotides

Bulged bases

9FQZ|1|L5|U|4354

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|U|4352
9FQZ|1|L5|PSU|4353
9FQZ|1|L5|U|4354
9FQZ|1|L5|G|4355
9FQZ|1|L5|G|4356
9FQZ|1|L5|G|4357
9FQZ|1|L5|U|4358
9FQZ|1|L5|U|4359
9FQZ|1|L5|U|4360
9FQZ|1|L5|PSU|4361
9FQZ|1|L5|A|4362

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain La

60S ribosomal protein L27a

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L36a