3D structure

PDB id
9FQZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
AGCAGAAU
Length
8 nucleotides
Bulged bases
9FQZ|1|L5|G|4475
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9FQZ|1|L5|A|4474
9FQZ|1|L5|G|4475
9FQZ|1|L5|C|4476
9FQZ|1|L5|A|4477
9FQZ|1|L5|G|4478
9FQZ|1|L5|A|4479
9FQZ|1|L5|A|4480
9FQZ|1|L5|U|4481

Current chains

Chain L5
LSU rRNA

Nearby chains

Chain CB
Elongation factor 2
Chain LH
60S ribosomal protein L9
Chain Lm
Ubiquitin-60S ribosomal protein L40

Coloring options:

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