HL_9FQZ_091

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

9FQZ|1|S2|U|1621, 9FQZ|1|S2|U|1622, 9FQZ|1|S2|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|S2|A|1614
9FQZ|1|S2|U|1615
9FQZ|1|S2|U|1616
9FQZ|1|S2|G|1617
9FQZ|1|S2|C|1618
9FQZ|1|S2|A|1619
9FQZ|1|S2|A|1620
9FQZ|1|S2|U|1621
9FQZ|1|S2|U|1622
9FQZ|1|S2|A|1623
9FQZ|1|S2|U|1624
9FQZ|1|S2|U|1625

Current chains

Chain S2

SSU rRNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19

Chain Sd

40S ribosomal protein S29