HL_9FS6_028

3D structure

PDB id

9FS6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA with h44 in up position

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGAAACUCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FS6|1|2|C|1278
9FS6|1|2|U|1279
9FS6|1|2|G|1280
9FS6|1|2|A|1281
9FS6|1|2|A|1282
9FS6|1|2|A|1283
9FS6|1|2|C|1284
9FS6|1|2|U|1285
9FS6|1|2|C|1286
9FS6|1|2|G|1287

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain O

Small ribosomal subunit protein uS13

Chain P

Small ribosomal subunit protein uS14

Chain T

Small ribosomal subunit protein uS19