HL_9FSF_021
3D structure
- PDB id
- 9FSF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAG(C4J)CAACGC
- Length
- 10 nucleotides
- Bulged bases
- 9FSF|1|2|G|935
- QA status
- Modified nucleotides: C4J
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FSF|1|2|G|927
9FSF|1|2|A|928
9FSF|1|2|G|929
9FSF|1|2|C4J|930
9FSF|1|2|C|931
9FSF|1|2|A|932
9FSF|1|2|A|933
9FSF|1|2|C|934
9FSF|1|2|G|935
9FSF|1|2|C|936
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain K
- Small ribosomal subunit protein uS9
- Chain L
- Small ribosomal subunit protein uS10
- Chain O
- Small ribosomal subunit protein uS13
- Chain P
- Small ribosomal subunit protein uS14
- Chain T
- Small ribosomal subunit protein uS19
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