HL_9FY0_022

3D structure

PDB id

9FY0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUAACGAC

Length

9 nucleotides

Bulged bases

9FY0|1|2|G|982

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FY0|1|2|G|976
9FY0|1|2|C|977
9FY0|1|2|U|978
9FY0|1|2|A|979
9FY0|1|2|A|980
9FY0|1|2|C|981
9FY0|1|2|G|982
9FY0|1|2|A|983
9FY0|1|2|C|984

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain P

Small ribosomal subunit protein uS14

Chain T

Small ribosomal subunit protein uS19

Chain Y

Small ribosomal subunit protein eS31