HL_9FY0_029

3D structure

PDB id

9FY0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUCAACAAU

Length

9 nucleotides

Bulged bases

9FY0|1|2|A|1328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FY0|1|2|A|1321
9FY0|1|2|U|1322
9FY0|1|2|C|1323
9FY0|1|2|A|1324
9FY0|1|2|A|1325
9FY0|1|2|C|1326
9FY0|1|2|A|1327
9FY0|1|2|A|1328
9FY0|1|2|U|1329

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain K

Small ribosomal subunit protein uS9

Chain L

Small ribosomal subunit protein uS10

Chain O

Small ribosomal subunit protein uS13

Chain P

Small ribosomal subunit protein uS14

Chain U

Small ribosomal subunit protein eS19