HL_9G1Z_003
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G1Z_003 not in the Motif Atlas
- Homologous match to HL_8CRE_003
- Geometric discrepancy: 0.0571
- The information below is about HL_8CRE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9G1Z|1|1|C|89
9G1Z|1|1|G|90
9G1Z|1|1|G|91
9G1Z|1|1|C|92
9G1Z|1|1|G|93
9G1Z|1|1|A|94
9G1Z|1|1|G|95
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 10
- Transfer RNA; tRNA
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain t
- 60S ribosomal protein L13
- Chain y
- Ribosomal 60S subunit protein L18A
Coloring options: