HL_9G1Z_018

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGUUC

Length

6 nucleotides

Bulged bases

9G1Z|1|1|G|761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_018 not in the Motif Atlas

Homologous match to HL_8CRE_017

Geometric discrepancy: 0.0491

The information below is about HL_8CRE_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9G1Z|1|1|G|759
9G1Z|1|1|U|760
9G1Z|1|1|G|761
9G1Z|1|1|U|762
9G1Z|1|1|U|763
9G1Z|1|1|C|764

Current chains

Chain 1

25S rRNA

Nearby chains

Chain t

60S ribosomal protein L13