HL_9G1Z_040
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 9G1Z|1|1|C|1842, 9G1Z|1|1|G|1844, 9G1Z|1|1|A|1846
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G1Z_040 not in the Motif Atlas
- Homologous match to HL_8CRE_040
- Geometric discrepancy: 0.0631
- The information below is about HL_8CRE_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9G1Z|1|1|C|1840
9G1Z|1|1|G|1841
9G1Z|1|1|C|1842
9G1Z|1|1|A|1843
9G1Z|1|1|G|1844
9G1Z|1|1|C|1845
9G1Z|1|1|A|1846
9G1Z|1|1|G|1847
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
- Chain l
- Ribosomal 60S subunit protein L4B
- Chain x
- Ribosomal 60S subunit protein L17B
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