HL_9G1Z_051

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCUG

Length

5 nucleotides

Bulged bases

9G1Z|1|1|C|2545, 9G1Z|1|1|U|2546

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_051 not in the Motif Atlas

Homologous match to HL_8CRE_052

Geometric discrepancy: 0.2128

The information below is about HL_8CRE_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

9G1Z|1|1|C|2543
9G1Z|1|1|U|2544
9G1Z|1|1|C|2545
9G1Z|1|1|U|2546
9G1Z|1|1|G|2547

Current chains

Chain 1

25S rRNA

Nearby chains

Chain AA

60S ribosomal protein L27