HL_9G1Z_059

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_059 not in the Motif Atlas

Homologous match to HL_8CRE_060

Geometric discrepancy: 0.1326

The information below is about HL_8CRE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9G1Z|1|1|C|2812
9G1Z|1|1|G|2813
9G1Z|1|1|U|2814
9G1Z|1|1|U|2815
9G1Z|1|1|C|2816
9G1Z|1|1|A|2817
9G1Z|1|1|U|2818
9G1Z|1|1|A|2819
9G1Z|1|1|G|2820

Current chains

Chain 1

25S rRNA

Nearby chains

Chain AN

Rpl40bp

Chain r

Ribosomal 60S subunit protein L10