HL_9G1Z_061

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_061 not in the Motif Atlas

Homologous match to HL_8CRE_062

Geometric discrepancy: 0.084

The information below is about HL_8CRE_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9G1Z|1|1|U|2892
9G1Z|1|1|U|2893
9G1Z|1|1|G|2894
9G1Z|1|1|U|2895
9G1Z|1|1|U|2896
9G1Z|1|1|C|2897
9G1Z|1|1|A|2898

Current chains

Chain 1

25S rRNA

Nearby chains

Chain k

60S ribosomal protein L3