HL_9G1Z_065
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9G1Z|1|1|G|3088, 9G1Z|1|1|C|3092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G1Z_065 not in the Motif Atlas
- Homologous match to HL_8CRE_066
- Geometric discrepancy: 0.0452
- The information below is about HL_8CRE_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
9G1Z|1|1|C|3082
9G1Z|1|1|U|3083
9G1Z|1|1|G|3084
9G1Z|1|1|A|3085
9G1Z|1|1|A|3086
9G1Z|1|1|C|3087
9G1Z|1|1|G|3088
9G1Z|1|1|C|3089
9G1Z|1|1|C|3090
9G1Z|1|1|U|3091
9G1Z|1|1|C|3092
9G1Z|1|1|U|3093
9G1Z|1|1|A|3094
9G1Z|1|1|A|3095
9G1Z|1|1|G|3096
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AN
- Rpl40bp
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain w
- Ribosomal 60S subunit protein L16A
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