HL_9G1Z_079

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

9G1Z|1|A|U|157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_079 not in the Motif Atlas

Homologous match to HL_8CRE_193

Geometric discrepancy: 0.086

The information below is about HL_8CRE_193

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9G1Z|1|A|G|152
9G1Z|1|A|U|153
9G1Z|1|A|A|154
9G1Z|1|A|A|155
9G1Z|1|A|U|156
9G1Z|1|A|U|157
9G1Z|1|A|C|158

Current chains

Chain A

18S rRNA

Nearby chains

Chain H

40S ribosomal protein S6

Chain Z

40S ribosomal protein S24