HL_9G1Z_086

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

9G1Z|1|A|A|414

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_086 not in the Motif Atlas

Homologous match to HL_8CRE_201

Geometric discrepancy: 0.1482

The information below is about HL_8CRE_201

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

9G1Z|1|A|C|412
9G1Z|1|A|C|413
9G1Z|1|A|A|414
9G1Z|1|A|A|415
9G1Z|1|A|G|416
9G1Z|1|A|G|417

Current chains

Chain A

18S rRNA

Nearby chains

Chain 6

Ribosomal 60S subunit protein L23B

Chain H

40S ribosomal protein S6