HL_9G1Z_091

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

9G1Z|1|A|U|766

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_091 not in the Motif Atlas

Homologous match to HL_8CRE_208

Geometric discrepancy: 0.0771

The information below is about HL_8CRE_208

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_65313.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

9G1Z|1|A|C|762
9G1Z|1|A|C|763
9G1Z|1|A|U|764
9G1Z|1|A|U|765
9G1Z|1|A|U|766
9G1Z|1|A|G|767

Current chains

Chain A

18S rRNA

Nearby chains

Chain K

Ribosomal 40S subunit protein S9B

Chain Z

40S ribosomal protein S24