3D structure

PDB id
9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AUUUUGUUGGUUUCU
Length
15 nucleotides
Bulged bases
9G1Z|1|A|U|818, 9G1Z|1|A|G|819, 9G1Z|1|A|U|820, 9G1Z|1|A|U|821
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9G1Z|1|A|A|814
9G1Z|1|A|U|815
9G1Z|1|A|U|816
9G1Z|1|A|U|817
9G1Z|1|A|U|818
9G1Z|1|A|G|819
9G1Z|1|A|U|820
9G1Z|1|A|U|821
9G1Z|1|A|G|822
9G1Z|1|A|G|823
9G1Z|1|A|U|824
9G1Z|1|A|U|825
9G1Z|1|A|U|826
9G1Z|1|A|C|827
9G1Z|1|A|U|828

Current chains

Chain A
18S rRNA

Nearby chains

Chain M
Ribosomal 40S subunit protein S11A

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0931 s