HL_9G4L_005

3D structure

PDB id

9G4L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Group II intron assembly intermediate Domain 1 to 3 "Partly open" state

Experimental method

ELECTRON MICROSCOPY

Resolution

4.01 Å

Loop

Sequence

UGCAUAACAA

Length

10 nucleotides

Bulged bases

9G4L|1|A|G|179, 9G4L|1|A|C|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G4L|1|A|U|178
9G4L|1|A|G|179
9G4L|1|A|C|180
9G4L|1|A|A|181
9G4L|1|A|U|182
9G4L|1|A|A|183
9G4L|1|A|A|184
9G4L|1|A|C|185
9G4L|1|A|A|186
9G4L|1|A|A|187

Current chains

Chain A

GROUP IIC INTRON

Nearby chains