HL_9G5D_012

3D structure

PDB id

9G5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit (State C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAAAUCAACAAA

Length

12 nucleotides

Bulged bases

9G5D|1|A|A|1118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G5D|1|A|U|1115
9G5D|1|A|A|1116
9G5D|1|A|A|1117
9G5D|1|A|A|1118
9G5D|1|A|U|1119
9G5D|1|A|C|1120
9G5D|1|A|A|1121
9G5D|1|A|A|1122
9G5D|1|A|C|1123
9G5D|1|A|A|1124
9G5D|1|A|A|1125
9G5D|1|A|A|1126

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain B

28S ribosomal protein S2, mitochondrial

Chain D

28S ribosomal protein S5, mitochondrial

Chain E

28S ribosomal protein S6, mitochondrial

Chain S

28S ribosomal protein S23, mitochondrial