HL_9GGR_037
3D structure
- PDB id
- 9GGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CACUCAUAAUG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GGR_037 not in the Motif Atlas
- Homologous match to HL_4WZD_209
- Geometric discrepancy: 0.247
- The information below is about HL_4WZD_209
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GGR|1|A3|C|31
9GGR|1|A3|A|32
9GGR|1|A3|C|33
9GGR|1|A3|U|34
9GGR|1|A3|C|35
9GGR|1|A3|A|36
9GGR|1|A3|U|37
9GGR|1|A3|A|38
9GGR|1|A3|A|39
9GGR|1|A3|U|40
9GGR|1|A3|G|41
Current chains
- Chain A3
- A-site tRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AV
- Large subunit ribosomal RNA; LSU rRNA
- Chain w
- messenger RNA
- Chain z
- Small ribosomal subunit protein uS12
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