HL_9GHA_070

3D structure

PDB id

9GHA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9GHA|1|a|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHA_070 not in the Motif Atlas

Homologous match to HL_5J7L_171

Geometric discrepancy: 0.2925

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9GHA|1|a|C|1533
9GHA|1|a|U|1534
9GHA|1|a|A|1535
9GHA|1|a|C|1536
9GHA|1|a|G|1537
9GHA|1|a|G|1538

Current chains

Chain a

23S rRNA

Nearby chains