HL_9GHA_072
3D structure
- PDB id
- 9GHA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.24 Å
Loop
- Sequence
- CGACAC(6MZ)G
- Length
- 8 nucleotides
- Bulged bases
- 9GHA|1|a|A|1614, 9GHA|1|a|A|1616, 9GHA|1|a|6MZ|1618
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHA_072 not in the Motif Atlas
- Homologous match to HL_5J7L_173
- Geometric discrepancy: 0.0365
- The information below is about HL_5J7L_173
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9GHA|1|a|C|1612
9GHA|1|a|G|1613
9GHA|1|a|A|1614
9GHA|1|a|C|1615
9GHA|1|a|A|1616
9GHA|1|a|C|1617
9GHA|1|a|6MZ|1618
9GHA|1|a|G|1619
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain r
- 50S ribosomal protein L22
Coloring options: