HL_9GHA_098

3D structure

PDB id

9GHA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

9GHA|1|a|U|2797, 9GHA|1|a|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHA_098 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.2889

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9GHA|1|a|C|2795
9GHA|1|a|U|2796
9GHA|1|a|U|2797
9GHA|1|a|U|2798
9GHA|1|a|A|2799
9GHA|1|a|A|2800
9GHA|1|a|G|2801

Current chains

Chain a

23S rRNA

Nearby chains