HL_9GHC_029

3D structure

PDB id

9GHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9GHC|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHC_029 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.2265

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

9GHC|1|A|C|1449
9GHC|1|A|U|1450
9GHC|1|A|U|1451
9GHC|1|A|C|1452
9GHC|1|A|G|1453
9GHC|1|A|G|1454

Current chains

Chain A

16S rRNA

Nearby chains