HL_9GHC_031
3D structure
- PDB id
- 9GHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 9GHC|1|Z|G|18, 9GHC|1|Z|G|19, 9GHC|1|Z|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHC_031 not in the Motif Atlas
- Homologous match to HL_7U2I_103
- Geometric discrepancy: 0.255
- The information below is about HL_7U2I_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GHC|1|Z|C|13
9GHC|1|Z|A|14
9GHC|1|Z|G|15
9GHC|1|Z|C|16
9GHC|1|Z|C|17
9GHC|1|Z|U|17|||A
9GHC|1|Z|G|18
9GHC|1|Z|G|19
9GHC|1|Z|U|20
9GHC|1|Z|A|21
9GHC|1|Z|G|22
Current chains
- Chain Z
- tRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
Coloring options: