HL_9GHD_090
3D structure
- PDB id
- 9GHD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.41 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHD_090 not in the Motif Atlas
- Homologous match to HL_5J7L_193
- Geometric discrepancy: 0.125
- The information below is about HL_5J7L_193
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9GHD|1|a|A|2471
9GHD|1|a|G|2472
9GHD|1|a|U|2473
9GHD|1|a|U|2474
9GHD|1|a|C|2475
9GHD|1|a|A|2476
9GHD|1|a|U|2477
9GHD|1|a|A|2478
9GHD|1|a|U|2479
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain V
- Far1
- Chain W
- Elongation factor G
- Chain g
- 50S ribosomal protein L6
Coloring options: