HL_9GHE_037

3D structure

PDB id

9GHE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

9GHE|1|a|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHE_037 not in the Motif Atlas

Geometric match to HL_7KKV_002

Geometric discrepancy: 0.1048

The information below is about HL_7KKV_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

9GHE|1|a|U|137
9GHE|1|a|U|138
9GHE|1|a|U|139
9GHE|1|a|C|140
9GHE|1|a|G|141
9GHE|1|a|A|142

Current chains

Chain a

23S rRNA

Nearby chains

Chain s

50S ribosomal protein L23