HL_9GHF_074

3D structure

PDB id

9GHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

9GHF|1|a|U|1729, 9GHF|1|a|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHF_074 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.2952

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9GHF|1|a|C|1727
9GHF|1|a|C|1728
9GHF|1|a|U|1729
9GHF|1|a|C|1730
9GHF|1|a|G|1731
9GHF|1|a|C|1732
9GHF|1|a|G|1733

Current chains

Chain a

23S rRNA

Nearby chains