HL_9GHG_007

3D structure

PDB id

9GHG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

AAAAUU

Length

6 nucleotides

Bulged bases

9GHG|1|A|U|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHG_007 not in the Motif Atlas

Homologous match to HL_4WF9_007

Geometric discrepancy: 0.147

The information below is about HL_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

11

Unit IDs

9GHG|1|A|A|228
9GHG|1|A|A|229
9GHG|1|A|A|230
9GHG|1|A|A|231
9GHG|1|A|U|232
9GHG|1|A|U|233

Current chains

Chain A

23S rRNA

Nearby chains