HL_9GHG_050
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9GHG|1|A|A|2057, 9GHG|1|A|A|2058, 9GHG|1|A|G|2059
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHG_050 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.0739
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9GHG|1|A|G|2054
9GHG|1|A|U|2055
9GHG|1|A|G|2056
9GHG|1|A|A|2057
9GHG|1|A|A|2058
9GHG|1|A|G|2059
9GHG|1|A|A|2060
9GHG|1|A|U|2061
9GHG|1|A|G|2062
9GHG|1|A|C|2063
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein bL32
- Chain H
- 50S ribosomal protein L3
- Chain U
- 50S ribosomal protein L21
Coloring options: