HL_9GHG_058

3D structure

PDB id

9GHG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

9GHG|1|A|C|2433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHG_058 not in the Motif Atlas

Homologous match to HL_9DFE_057

Geometric discrepancy: 0.1065

The information below is about HL_9DFE_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

9GHG|1|A|C|2431
9GHG|1|A|G|2432
9GHG|1|A|C|2433
9GHG|1|A|A|2434
9GHG|1|A|U|2435
9GHG|1|A|G|2436
9GHG|1|A|G|2437
9GHG|1|A|A|2438
9GHG|1|A|A|2439
9GHG|1|A|G|2440

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15