HL_9GJ5_001

3D structure

PDB id

9GJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with NatA in distal position and Ebp1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.61 Å

Loop

Sequence

UCUGAUCG

Length

8 nucleotides

Bulged bases

9GJ5|1|1|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GJ5|1|1|U|204
9GJ5|1|1|C|205
9GJ5|1|1|U|206
9GJ5|1|1|G|207
9GJ5|1|1|A|208
9GJ5|1|1|U|209
9GJ5|1|1|C|210
9GJ5|1|1|G|211

Current chains

Chain 1

28S rRNA

Nearby chains

Chain B

N-alpha-acetyltransferase 15, NatA auxiliary subunit

Chain LY

Large ribosomal subunit protein uL24