HL_9GJ5_006

3D structure

PDB id

9GJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with NatA in distal position and Ebp1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.61 Å

Loop

Sequence

GUUCAGAUCC

Length

10 nucleotides

Bulged bases

9GJ5|1|1|U|2530, 9GJ5|1|1|C|2531

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GJ5|1|1|G|2523
9GJ5|1|1|U|2524
9GJ5|1|1|U|2525
9GJ5|1|1|C|2526
9GJ5|1|1|A|2527
9GJ5|1|1|G|2528
9GJ5|1|1|A|2529
9GJ5|1|1|U|2530
9GJ5|1|1|C|2531
9GJ5|1|1|C|2532

Current chains

Chain 1

28S rRNA

Nearby chains

Chain A

Proliferation-associated protein 2G4

Chain LR

60S ribosomal protein L19

Chain LX

60S ribosomal protein L23a