HL_9GJ5_007

3D structure

PDB id

9GJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with NatA in distal position and Ebp1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.61 Å

Loop

Sequence

CGGUUCCGG

Length

9 nucleotides

Bulged bases

9GJ5|1|1|U|2708, 9GJ5|1|1|C|2709, 9GJ5|1|1|G|2711

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GJ5|1|1|C|2704
9GJ5|1|1|G|2705
9GJ5|1|1|G|2706
9GJ5|1|1|U|2707
9GJ5|1|1|U|2708
9GJ5|1|1|C|2709
9GJ5|1|1|C|2710
9GJ5|1|1|G|2711
9GJ5|1|1|G|2712

Current chains

Chain 1

28S rRNA

Nearby chains

Chain A

Proliferation-associated protein 2G4

Chain LR

60S ribosomal protein L19

Chain LX

60S ribosomal protein L23a