HL_9GR1_052

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

9GR1|1|a|U|617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GR1_052 not in the Motif Atlas

Geometric match to HL_7KKV_003

Geometric discrepancy: 0.2081

The information below is about HL_7KKV_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9GR1|1|a|C|613
9GR1|1|a|G|614
9GR1|1|a|A|615
9GR1|1|a|A|616
9GR1|1|a|U|617
9GR1|1|a|A|618
9GR1|1|a|G|619

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain e

50S ribosomal protein L4